Koetschan et al. (2010) NAR 38:D275-9
Selig et al. (2008) NAR 36:D377-380.
Schultz et al. (2006) NAR 34:W704-7.
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ITS2 3D structure
(Keller et al. 2010)


Chlorophyta hypertree

(Buchheim et al. 2011)
Fig1, Fig2, Fig3, Fig4

GI 152003745

Figure

(Save as SVG or PNG) view with Pseudoviewer

Details

GI 152003745 see NCBI Nucleotide
Accession EF457719
Date 2011/04/01
Lineage see NCBI Taxonomy root cellular organisms Eukaryota Viridiplantae Streptophyta Streptophytina Embryophyta Tracheophyta Euphyllophyta Spermatophyta Magnoliophyta eudicotyledons core eudicotyledons rosids fabids Fabales Fabaceae Papilionoideae Crotalarieae Lebeckia Lebeckia cytisoides 
Sequence CATCGTTGCCCCAGTGCCCTGGCCTCGCGCTAGGCACTGAGCGGGGCGAATGCTGGCTTCCCGTGAGTAACGCCTCATGGTTGGTTGAAAACTGAGTCATTGGTGGAGGGCGCCGTGATGGATGGTGGTTGAGTAAAAGCTCGAGACCGATCGTGCGTGTCACCCCCACCGGCTTTGCGACTCTACGGCCCATGAGCGTNTNTTGGTCGCCCAAGATCGG
Structure .....(((((((((((((.((((.....))))))))))....)))))))..(((.((.....)).))).((((.((((((...((((......(((((.(((((((.(((.((((((..((.((((..((((((....)))))).)))).)).)))).))..))))))))))......)))))..))))))))))))))....(((((......))))).
Method 1: RNAfold - direct fold
Energy -73.5 kcal/mol
Model for
root see NCBI Taxonomy
cellular organisms see NCBI Taxonomy
Eukaryota see NCBI Taxonomy
Viridiplantae see NCBI Taxonomy
Streptophyta see NCBI Taxonomy
Streptophytina see NCBI Taxonomy
Embryophyta see NCBI Taxonomy
Tracheophyta see NCBI Taxonomy
Euphyllophyta see NCBI Taxonomy
Spermatophyta see NCBI Taxonomy
Magnoliophyta see NCBI Taxonomy
eudicotyledons see NCBI Taxonomy
core eudicotyledons see NCBI Taxonomy
rosids see NCBI Taxonomy
fabids see NCBI Taxonomy
Fabales see NCBI Taxonomy
Fabaceae see NCBI Taxonomy
Papilionoideae see NCBI Taxonomy
Crotalarieae see NCBI Taxonomy
Lotononis see NCBI Taxonomy
Lotononis falcata see NCBI Taxonomy
169260449 (Method 2) see NCBI Nucleotide
Annotation Process: Genbank annotation
Start: 399
End: 618

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