| GI |
27497404  |
| Accession |
AJ534710 |
| Date |
2011/04/01 |
Lineage  |
root  ; cellular organisms ; Eukaryota ; Fungi/Metazoa group ; Fungi ; Dikarya ; Basidiomycota ; Agaricomycotina ; Agaricomycetes ; Agaricomycetes incertae sedis ; Cantharellales ; Clavulinaceae ; environmental samples ; Clavulinaceae sp. D44
|
| Sequence |
GTGAAATTCTCAAGCTAGATGCTTTTTTGTATCTCGGTTTGGTTATTGGGCTCTGCCGTGTCCTTCATTGGGACGGCTGGCCTTAAAGGCATTAGCTGACCCTCATGATGGCATTGGTTCTACTCAGCGTGATAATAATCTGACCGCTGAGGACATCTTTCGGGATGGCCAATTCTCGTTTGGGTTGCTCTCTAATCTGGATTATGGGTTGCCAACCAGCAATCTATTCCATTTTCAACTTTGA |
| Structure |
.........(((((((((((((......)))))).))))))).....((.(...(((((..(((.....)))))))).).))...........((.((.((.((.((((.((.(((((..........(((((....))).)..)))))).).)))....)).)).)).)).)).......(((......)))................................................... |
| Method |
2: Homology modeled |
| Energy |
-17.6 kcal/mol |
| Model |
206114078 |
| Alignment |
Sbjct: ATTAATATATATATCAACCC--TCTCTTTGTTGAGTGT-GGTTTGGATGTGGGGGTTTGCTGGCCTCCCAAATGGTTCAGCTCCCCTGAAATGCATTAGCAGAACAACCCTGT-TCATTGGT----------GTGATAACTATCTA--CGCTATTGA-ATGTGAAGGGAAGTTCAGCTTTCTAACTGTCTTTGGACAATTCATCATTAATGT------------------------------------
.............((((.((--.(((......)))...-)).))))....(((((...(((((...((.....)).))))).)))))..........(((.((((..((((((-(((.((((----------(((((....))).)--))))).)))-))....))))..)))).))).......((((....))))...............------------------------------------
Query: ----GTGAAATTCTCAAGCTAGATGCTTTTTTGTATCTCGGTTTGGTTATTGGGCTCTGCCGTGTCCTTCATTGGGACGGCTGGCCTTAAAGGCATTAGCTGACCCTCATGATGGCATTGGTTCTACTCAGCGTGATAATAATCTGACCGCTGAGGACATCTTTCGGGATGGCCAATTCTCGTTTGGGTTGCTCTCTAATCTGGATTATGGGTTGCCAACCAGCAATCTATTCCATTTTCAACTTTGA
----.........((((.((...(((......)))....)).)))).....((.(...(((((...((.....)).))))).).))...........((..(.((..(.((((..(..((((..........(((((....))).)..)))))..)..))....)).)..)).)..)).......(((......)))...................................................
CBCs: _______________________((________))___________________(_____(_(_____________)_)___)____________________(______(_____________________________________________________)______)_____________(_(______)_)___________________________________________________
HCBCs: ___________________(___________________)___________________________(_____)________________________(__________(_(______(______________(___________)______)______)_____)__________)_______________________________________________________________________ |
| Transferred percentage of helices |
I: 100
II: 83.333
III: 80
IV: 75
|
| Annotation |
Process: HMM annotation
Start: 367
End: 610
|
