| GI |
2714  |
| Accession |
X62981 |
| Date |
2011/04/01 |
Lineage  |
root  ; cellular organisms ; Eukaryota ; Fungi/Metazoa group ; Fungi ; Dikarya ; Ascomycota ; saccharomyceta ; Pezizomycotina ; leotiomyceta ; sordariomyceta ; Sordariomycetes ; Hypocreomycetidae ; Hypocreales ; Clavicipitaceae ; mitosporic Clavicipitaceae ; Neotyphodium ; Neotyphodium huerfanum
|
| Sequence |
ATTTCAACCCTCAAGCCCGCTGCGTGCTTGGTGTTGGGGACCGGCCCGCCCGCCTCGNCNGCGGCGNNNNNCCCTGAAATGAATTGGCGGTCTCGTCGCAGCCTCCTTTGCGTAGTAGCACACCACCTCGCAACCGGGAGCGCGGCGCGGCCACTGCCGTAAAACGCCCAACTTCTCCAAGAGTTGA |
| Structure |
..........(((((((.(...)).))))))..((((((((((..(((.((((...)).)))))))))...)))))).......(((((((...(((((.((((((((((((.(((.(....).)).))))))..))))).))...))))).))))))).........((((((......)))))). |
| Method |
2: Homology modeled |
| Energy |
-39.5 kcal/mol |
| Model |
40788168 |
| Alignment |
Sbjct: ATTTCAACCCTCAAGCCC-CCGCG-GTTTGGTGTTGGGGACCGG--CGAC--TTTAGCTAGCGCCG----CCCCTGAAATGAATTGGCGGTCTCGTCGCGGCCTCCTCTGCGTAGTAGCACA--ACCTCGCAG-CAGGAGCGCGGCGCGGCCACTGCCGTAAAACGCCCAACTTTTTTCTCAAGAGTTGA
..........(((((((.-....)-))))))..((((((..(((--((.(--(......)))))))----.)))))).......(((((((...((((((((((((((((((..((......--))..)))))-.))))).))..)))))).))))))).........((((((((.....)))))))).
Query: ATTTCAACCCTCAAGCCCGCTGCGTGCTTGGTGTTGGGGACCGGCCCGCCCGCCTCGNCNGCGGCGNNNNNCCCTGAAATGAATTGGCGGTCTCGTCGCAGCCTCCTTTGCGTAGTAGCACACCACCTCGCAACCGGGAGCGCGGCGCGGCCACTGCCGTAAAACGCCCAACTTCT---CCAAGAGTTGA
..........(((((((......).))))))..((((((..((...((.(..........))).)).....)))))).......(((((((...(((((.((((((((((((..((........))..)))))..))))).))...))))).))))))).........((((((.(---..).)))))).
CBCs: ___________________________________________________________________________________________________________(________________________)_________________________________________________________
HCBCs: ______________(___________)_______________________________________________________________________________(____________________________)______________________________________________________ |
| Transferred percentage of helices |
I: 100
II: 84.615
III: 96.296
IV: 87.5
|
| Annotation |
Process: HMM annotation
Start: 83
End: 269
|
