| GI |
317416295  |
| Accession |
AJ537387 |
| Date |
2011/04/01 |
Lineage  |
root  ; cellular organisms ; Eukaryota ; Fungi/Metazoa group ; Fungi ; Dikarya ; Basidiomycota ; Agaricomycotina ; Agaricomycetes ; Agaricomycetes incertae sedis ; Polyporales ; Ganodermataceae ; Amauroderma ; Amauroderma subrugosum
|
| Sequence |
ATTTCAACCCTCGAGCGCCCCCGGGTGCCCGGCGTTGGGGGACGGCACCGCCCTCGCAGCGGTCCCGCCGCCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCCCCTGCGCAGTAGTGAAAGCAAACTCGCACCGGAGCGCGGCGCGGCCACGCCGTGAAACCCCCCAAGCAACACGAAATGTTGGCCT |
| Structure |
..........(((.(((((....))))).)))..(((((((.(((((((((..(...))))))...)))))))))))..(((.((((((....((((((.((.(((..((((.(((.((....))..)))))))..))))))))))))).))))...))).......(..(((.....(...))))).... |
| Method |
2: Homology modeled |
| Energy |
-60 kcal/mol |
| Model |
133740958 |
| Alignment |
Sbjct: ATTTCAACCCTCGAACCCCCCTAGGGGGGTCCGGCGTTGGGGATCGGGGACCCCTAAGACGGGATC---CCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAC-AACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCC--AACTTTCTGAAATGTTGA---
..........(((.((((((....)))))).)))..((((((.((((((.(((.......))).))---))))))))))..(((.((((((....((((((.((.((((.((((.(((.((....))-.)))))))..)))))))))))))).))))....))).......(--(((..........)))).---
Query: ATTTCAACCCTCGAGCGCCCCC--GGGTGCCCGGCGTTGGGGGACGGCACCGCCCTCGCAGCGGTCCCGCCGCCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCCCCTGCGCAGTAGTGAAAGCAAACTCGCACC-GGAGCGCGGCGCGGCCACG-CCGTGAAACCCCCCAAGCAACACGAAATGTTGGCCT
..........(((.((((((..--)))))).)))..((((((..(((.(.(((.......))).)....))).))))))..(((.((((((....((((((.((.(((..((((.(((.((....))..)))))))..-))))))))))))).)))).-..))).......(..(((..........))))....
CBCs: ______________(_(__________)_)_____________________(_________)_____________________________________________________________________________________________________________________________________
HCBCs: ________________________________________________(_______________)________________(_________________________(____________(____)_____________)_______________________)___________(____________)______ |
| Transferred percentage of helices |
I: 100
II: 86.667
III: 96.667
IV: 100
|
| Annotation |
Process: Mixed HMM and Genbank annotation
Start: 198
End: 388
|
