Koetschan et al. (2010) NAR 38:D275-9
Selig et al. (2008) NAR 36:D377-380.
Schultz et al. (2006) NAR 34:W704-7.
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ITS2 3D structure
(Keller et al. 2010)

Chlorophyta hypertree
(Buchheim et al. 2011)
Fig1, Fig2, Fig3, Fig4

GI 1405847

Figure

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Details

GI 1405847 see NCBI Nucleotide
Accession Z74732
Date 2011/04/01
Lineage see NCBI Taxonomy root ; cellular organisms ; Eukaryota ; Fungi/Metazoa group ; Fungi ; Dikarya ; Ascomycota ; saccharomyceta ; Pezizomycotina ; leotiomyceta ; sordariomyceta ; Sordariomycetes ; Hypocreomycetidae ; Hypocreomycetidae incertae sedis ; Glomerellaceae ; Glomerella ; Glomerella cingulata 
Sequence AACCCTCAAGCTCTGCTTGGTGTTGGGCCCTACACGGCTGATGTAGGCCCTCAAAGGTAGTGGCGGACCCTCCCGGAGCCTCCTTTGCGTAGTAACTTTTCGTCTCGCACTGGGATCCGGAGGGACTCTTGCCGTAAAACCCCCCAATTTTCCAAAGG
Structure .....((((((...))))))..(((((..((..(((.....))).))..))))).(((.((((((((((((((.(((...((((.((((.((.(....).).)..))))..)))))))))))))..).)))))))...)))......((((...))))
Method 2: Homology modeled
Energy -25.8 kcal/mol
Model 217314813
Alignment 
Sbjct: ATTTCAACCCTCAAGCTCTGCTTGGTGTTGGGGCCC-TACAGCCGATGTAGGCCCTCAAAGGTAGTGGCGGACCCTCCCGGAGCCTCCTTTGCGTAGTAACTTTACGTCTCGCACTGGGATCCGGAGGGACTCTTGCCGTAAAACCCCCCAACTTTCCAAAGGT
       ..........((((((...))))))..((((((.((-((((.....)))))).)))))).(((..((((((.((((((.(((...((((.((((..(((....)))....))))..)))))))))))))....))))))....))).....(((((...)))))
Query: -----AACCCTCAAGCTCTGCTTGGTGTTGGGCCCTACACGGCTGATGTAGGCCCTCAAAGGTAGTGGCGGACCCTCCCGGAGCCTCCTTTGCGTAGTAACTTTTCGTCTCGCACTGGGATCCGGAGGGACTCTTGCCGTAAAACCCCCCAATTTTCCAAAGG-
       -----.....((((((...))))))..(((((..((..(((.....))).))..))))).(((..((((((.((((((.(((...((((.((((..(.(....).)....))))..)))))))))))))....))))))....)))......((((...))))-
 CBCs: ____________________________________________________________________________________________________________________________________________________________________
HCBCs: ___________________________________(____(_____)___)_____________________________________________________________________________________________________(_________)_
Transferred percentage of helices I: 100
II: 83.333
III: 96.552
IV: 80
Annotation Process: Genbank annotation
Start: 1
End: 158

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