Koetschan et al. (2010) NAR 38:D275-9
Selig et al. (2008) NAR 36:D377-380.
Schultz et al. (2006) NAR 34:W704-7.
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ITS2 3D structure
(Keller et al. 2010)

Chlorophyta hypertree
(Buchheim et al. 2011)
Fig1, Fig2, Fig3, Fig4

GI 31789231

Figure

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Details

GI 31789231 see NCBI Nucleotide
Accession AY266368
Date 2011/04/01
Lineage see NCBI Taxonomy root ; cellular organisms ; Eukaryota ; Fungi/Metazoa group ; Fungi ; Dikarya ; Ascomycota ; saccharomyceta ; Pezizomycotina ; leotiomyceta ; sordariomyceta ; Sordariomycetes ; Hypocreomycetidae ; Hypocreomycetidae incertae sedis ; Glomerellaceae ; mitosporic Glomerellaceae ; Colletotrichum ; Colletotrichum truncatum 
Sequence ATTTCAACCCTCAAGCTCTGCTTGGTGTTGGGGCTCTACGGTTGACGTAGGCCCTTAAAGGTAGTGGCGGACCCTCTCGGAGCCTCCTTTGCGTAGTAACCATTTCGTCTCGCATTGGGATTCGGAGGGACTCTTAGCCGTAAAACCCCCAATTTTACTAAGGTTGA
Structure ....((((..((((((...)))))).))))((((.(((((.....))))))))).....(((..((((((((((((.((((...((((.((((.((..((......))))))))..)))))))))))))..)))..))))....)))..(((((((...))))))).
Method 1: RNAfold - direct fold
Energy -49.8 kcal/mol
Model for
root see NCBI Taxonomy
cellular organisms see NCBI Taxonomy
Eukaryota see NCBI Taxonomy
Fungi/Metazoa group see NCBI Taxonomy
Fungi see NCBI Taxonomy
Dikarya see NCBI Taxonomy
Ascomycota see NCBI Taxonomy
saccharomyceta see NCBI Taxonomy
Pezizomycotina see NCBI Taxonomy
leotiomyceta see NCBI Taxonomy
sordariomyceta see NCBI Taxonomy
Sordariomycetes see NCBI Taxonomy
Sordariomycetes incertae sedis see NCBI Taxonomy
Phyllachorales see NCBI Taxonomy
Phyllachoraceae see NCBI Taxonomy
unclassified Phyllachoraceae see NCBI Taxonomy
Phyllachoraceae sp. LM155 see NCBI Taxonomy
117652918 (Method 2) see NCBI Nucleotide
Annotation Process: HMM annotation
Start: 395
End: 561

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