| GI |
10197613  |
| Accession |
AF177742 |
| Date |
2011/04/01 |
Lineage  |
root  ; cellular organisms ; Eukaryota ; Fungi/Metazoa group ; Fungi ; Dikarya ; Ascomycota ; environmental samples ; uncultured Greenland glacial ice fungus IM1945-1(2)
|
| Sequence |
CNNGACCCGTTCGCGGGACCTGGCGTTGGGGATCANCCTGCCCCTGGCGGCGGCTGGCCCTGAAATCCACTGGCGGTTCCCAACTCCTCCGTGCAGTAATTAAACCTCNCGCGGCAGGATAACGGTTGAACCAACTTCGACCCCGTTAAACCCCCCACTNCTCAAGGTT |
| Structure |
(..(.((((....)))).)..)...((((((.(((.((.(((......))))).))))))))).......(((.(((((.....(((((((((..(...........).))))).))))........)))))..........)))...((((.............)))) |
| Method |
3: Partial structure |
| Energy |
-27.14 kcal/mol |
| Model |
1373303 |
| Alignment |
Sbjct: ATTTCAACCCTCAGGACCCGTTCGCGGGACCTGGCGTTGGGGATCAGCCTGCCCCTGGCGGCGGCTGGCCCTGAAATCCAGTGGCGGTTCCCTCGCGAACTCCTCCGTGCAGTAATTAAACCTCTCGCGGCAGGATAGCGGTTGAACC-------ACGCCGTTAAACCCCCCACTTCTCAAGGTTGA
..........(((((.((((....)))).)))))..((((((.((((((.(((......))))))))))))))).......(((((((((..((((....(((((((((.((...........))))))).))))..))))..)))))-------..))))...((((.............))))..
Query: --TTCAACCCNCNNGACCCGTTCGCGGGACCTGGCGTTGGGGATCANCCTGCCCCTGGCGGCGGCTGGCCCTGAAATCCACTGGCGGTTCCC-----AACTCCTCCGTGCAGTAATTAAACCTCNCGCGGCAGGATAACGGTTGAACCAACTTCGACCCCGTTAAACCCCCCACTNCTCAAGGTT--
--.........(..(.((((....)))).)..)...((((((.(((.((.(((......))))).))))))))).......(((.(((((..-----...(((((((((..(...........).))))).))))........)))))..........)))...((((.............))))--
CBCs: ___________________________________________________________________________________________________________________________________________________________________________________________
HCBCs: ___________________________________________________________________________________________________________________________________________________________________________________________ |
| Transferred percentage of helices |
I: 66.667
II: 93.333
III: 75
IV: 100
|
| Annotation |
Process: Mixed HMM and Genbank annotation
Start: 81
End: 258
|
