Koetschan et al. (2010) NAR 38:D275-9
Selig et al. (2008) NAR 36:D377-380.
Schultz et al. (2006) NAR 34:W704-7.
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ITS2 3D structure
(Keller et al. 2010)

Chlorophyta hypertree
(Buchheim et al. 2011)
Fig1, Fig2, Fig3, Fig4

GI 8101475

Figure

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Details

GI 8101475 see NCBI Nucleotide
Accession AF133771
Date 2011/04/01
Lineage see NCBI Taxonomy root ; cellular organisms ; Eukaryota ; Fungi/Metazoa group ; Fungi ; environmental samples ; uncultured fungus from Acaulospora colossica spore IVB.7 
Sequence TCGTGAATGAAATTTTTTACGGATCTGGGTTTTCCGAAATTTAATTTGGTAACCTAAAATTTATCTTAACAATATTTAGGTATGATATTGGAAATGTTCTATCTTGCATATTTTTTGTAAGTTCGTTGACAATGATTACCGATTGTTACGTCGTGTCATTCATCTTTATTTAGGTGAAATGAT
Structure (((((((..(....)))))))).....((.((..(.((((...)))).).)).))...........(((((((.(...((((..((((((..((((....(.((((((.(....)))))))).))))..))))).)))))))))))))......((((((((((........))))).)))))
Method 3: Partial structure
Energy -15.7 kcal/mol
Model 295418636
Alignment 
Sbjct: ---------CACAAAAATCGTGAATGAAATTTTTTTACGGATCTGGGTTTTCCGAAATTTAATTTGGTAACCTAAAATTTATCTTAACAATATTGAGGTATGATATTGGAAATGTTCTATCTTGCATATTTTTTGTAAGTTCCGTTGACAATGATTACCGATTTGTTACGTCGTGTCATTCATCTTTTATTTAGGTGATATGATTCAATCTTTTGAATTTCAA------------
       ---------........(((((((..((...))))))))).....((.((..(.((((...)))).).)).))...........(((((((.(...((((..((((((..((((....(.((((((.(....))))))))..))))..))))).))))))).))))))......(((((((((((...)....))))).)))))...................------------
Query: GGGTTGGATCACAAATATCGTGAATGAAA-TTTTTTACGGATCTGGGTTTTCCGAAATTTAATTTGGTAACCTAAAATTTATCTTAACAATATTTAGGTATGATATTGGAAATGTTCTATCTTGCATATTTTTTGTAAGTT-CGTTGACAATGATTACCGA-TTGTTACGTCGTGTCATTCATC-TTTATTTAGGTGAAATGATTCAATCTTTTGAATTTCAACCTCAAGTCMAG
       .................(((((((..((.-.))))))))).....((.((..(.((((...)))).).)).))...........(((((((.(...((((..((((((..((((....(.((((((.(....)))))))).-))))..))))).)))))))-))))))......((((((((((-........))))).)))))...............................
 CBCs: ___________________________________________________________________________________________________________________________________________________________________________________________________________________________________________
HCBCs: ___________________________________________________________________________________________________________________________________________________________________________________________________________________________________________
Transferred percentage of helices I: 100
II: 100
III: 100
IV: 90.909
Annotation Process: Blast (re)annotation
Start: 248
End: 478

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