Koetschan et al. (2010) NAR 38:D275-9
Selig et al. (2008) NAR 36:D377-380.
Schultz et al. (2006) NAR 34:W704-7.
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ITS2 3D structure
(Keller et al. 2010)

Chlorophyta hypertree
(Buchheim et al. 2011)
Fig1, Fig2, Fig3, Fig4

GI 298354133

Figure

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Details

GI 298354133 see NCBI Nucleotide
Accession AB509745
Date 2011/04/01
Lineage see NCBI Taxonomy root ; cellular organisms ; Eukaryota ; Fungi/Metazoa group ; Fungi ; Dikarya ; Basidiomycota ; Agaricomycotina ; Agaricomycetes ; Agaricomycetidae ; Agaricales ; Entolomataceae ; Entoloma ; Entoloma sp. 182-409 
Sequence ATAAAATTCTCAACCTCTCTTAGTTTATGGCTAAGTTAGGCTTGGATCATGGAAGCTGCTGGCTAGTCAAGTTAGCTCTTCTAAAATACATTTGCAAAGATATTTGCTGACTATGTTTGATATGATAATTATCTATATCATTCATGATCAGTGTCCCTTTGCCTCTAATAGTCTGCTAGACAAACTTGACAACTTTT
Structure .........(((((((..((((((.....))))))..))).))))....((((((..(((((((.....))))))).))))))..........((((((.....((((((.((((..(((((((((....))).))))))..)))).))))))...))))))........((((...))))................
Method 1: RNAfold - direct fold
Energy -49.8 kcal/mol
Model for
root see NCBI Taxonomy
cellular organisms see NCBI Taxonomy
Eukaryota see NCBI Taxonomy
Fungi/Metazoa group see NCBI Taxonomy
Fungi see NCBI Taxonomy
Dikarya see NCBI Taxonomy
Basidiomycota see NCBI Taxonomy
Agaricomycotina see NCBI Taxonomy
Agaricomycetes see NCBI Taxonomy
Agaricomycetidae see NCBI Taxonomy
Agaricales see NCBI Taxonomy
environmental samples see NCBI Taxonomy
uncultured Agaricales see NCBI Taxonomy
312206855 (Method 2) see NCBI Nucleotide
Marasmiaceae see NCBI Taxonomy
Lentinula see NCBI Taxonomy
Lentinula edodes see NCBI Taxonomy
2921 (Method 2) see NCBI Nucleotide
Campanella see NCBI Taxonomy
Campanella sp. MCA1689 see NCBI Taxonomy
64475666 (Method 2) see NCBI Nucleotide
Physalacriaceae see NCBI Taxonomy
Guyanagaster see NCBI Taxonomy
Guyanagaster necrorhiza see NCBI Taxonomy
299829496 (Method 2) see NCBI Nucleotide
299829497 (Method 2) see NCBI Nucleotide
Phallomycetidae see NCBI Taxonomy
Geastrales see NCBI Taxonomy
Geastraceae see NCBI Taxonomy
Geastrum see NCBI Taxonomy
Geastrum mirabile see NCBI Taxonomy
298354124 (Method 2) see NCBI Nucleotide
Annotation Process: HMM annotation
Start: 105
End: 301

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