Koetschan et al. (2010) NAR 38:D275-9
Selig et al. (2008) NAR 36:D377-380.
Schultz et al. (2006) NAR 34:W704-7.
Select a database version:
 
     
Browse
 		   
Predict
 		   
Model
 		   
Annotate
 		   
Motif
 		   
Tools
 		 
About
Flowchart
What's new
Citation
Cited by > 150
Press releases
Statistics
Updates
Supplements
Links
ITS2 in PubMed
ITS2 highlights
Staff
Funding
Acknowledgements
ITS2 group
publications
ITS2 of the month
Awards
Usage policy
Fun



ITS2 3D structure
(Keller et al. 2010)

Chlorophyta hypertree
(Buchheim et al. 2011)
Fig1, Fig2, Fig3, Fig4

GI 5764500

Figure

(Save as SVG or PNG) view with Pseudoviewer

Details

GI 5764500 see NCBI Nucleotide
Accession AF169998
Date 2011/04/01
Lineage see NCBI Taxonomy root ; cellular organisms ; Eukaryota ; Fungi/Metazoa group ; Fungi ; Dikarya ; Basidiomycota ; Agaricomycotina ; Agaricomycetes ; Agaricomycetes incertae sedis ; Polyporales ; Ganodermataceae ; Ganoderma ; Ganoderma tuberculosum 
Sequence AATCTTCAACTTACAGACCTTTGCGGGTTTGTAGGCTTGGACTTGGAGGCTTGTCGGCCGTGTTTCGGTCGGCTCCTCTTAAATGCATTAGCTTGATTCCTTCGGATCGGCTCTCGGTGTGATAATGTCTACGCCGCGACCGTGAAGYGTTTTGGCGAGCTTCTAACCGTCCTCGTTTGGACAGCTTTA
Structure ....((((((((((((((((....))))))))))).)))))...(((((...((((((((.....)))))))).)))))...........(((.(((..((((....(((.((.(((((((((...))).)))))).))))).)))).)))..))).(((((((((.((....)).))))).))))...
Method 1: RNAfold - direct fold
Energy -64.3 kcal/mol
Model for
root see NCBI Taxonomy
cellular organisms see NCBI Taxonomy
Eukaryota see NCBI Taxonomy
Fungi/Metazoa group see NCBI Taxonomy
Fungi see NCBI Taxonomy
Dikarya see NCBI Taxonomy
Basidiomycota see NCBI Taxonomy
Agaricomycotina see NCBI Taxonomy
Agaricomycetes see NCBI Taxonomy
Agaricomycetes incertae sedis see NCBI Taxonomy
Polyporales see NCBI Taxonomy
Ganodermataceae see NCBI Taxonomy
Ganoderma see NCBI Taxonomy
Ganoderma lucidum see NCBI Taxonomy
62275823 (Method 2) see NCBI Nucleotide
158934562 (Method 2) see NCBI Nucleotide
170791139 (Method 2) see NCBI Nucleotide
208659554 (Method 2) see NCBI Nucleotide
Ganoderma oerstedii see NCBI Taxonomy
474138 (Method 2) see NCBI Nucleotide
Ganoderma tsugae see NCBI Taxonomy
538017 (Method 2) see NCBI Nucleotide
77557442 (Method 2) see NCBI Nucleotide
Ganoderma weberianum see NCBI Taxonomy
474160 (Method 2) see NCBI Nucleotide
291359252 (Method 2) see NCBI Nucleotide
Ganoderma carnosum see NCBI Taxonomy
62275822 (Method 2) see NCBI Nucleotide
169656019 (Method 2) see NCBI Nucleotide
Ganoderma philippii see NCBI Taxonomy
38564060 (Method 2) see NCBI Nucleotide
Russulales see NCBI Taxonomy
Albatrellaceae see NCBI Taxonomy
Albatrellus see NCBI Taxonomy
Albatrellus ovinus see NCBI Taxonomy
226442241 (Method 2) see NCBI Nucleotide
Annotation Process: Genbank annotation
Start: 7
End: 195

If you use the database please cite.