Koetschan et al. (2010) NAR 38:D275-9
Selig et al. (2008) NAR 36:D377-380.
Schultz et al. (2006) NAR 34:W704-7.
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ITS2 3D structure
(Keller et al. 2010)

Chlorophyta hypertree
(Buchheim et al. 2011)
Fig1, Fig2, Fig3, Fig4

GI 116687750

Figure

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Details

GI 116687750 see NCBI Nucleotide
Accession DQ873622
Date 2011/04/01
Lineage see NCBI Taxonomy root ; cellular organisms ; Eukaryota ; Fungi/Metazoa group ; Fungi ; Dikarya ; Basidiomycota ; Agaricomycotina ; Agaricomycetes ; Agaricomycetes incertae sedis ; Corticiales ; Corticiaceae ; Hyphodontia ; Hyphodontia nespori 
Sequence GCGAAATCATCAACTCCTCTCTTTTGCTTTTGTAAAGGAGGGTGAGCTTGGACTTGGGGACTTTGCTGGCCCATTACTGGGTTCTGGCTTCCCTTGAATGCATTAGCTGGATCTCTATTCGCAGCATATATGCGGTGTGATAATGTCTTCACTGCATCGCTCGAGTTGAAGCTAGCTTCTAATCGTCCTTAGGGACAATCTCTGATCATTTC
Structure .........((((((((((((((((((....))))))))))).))).))))....(((((....(((((((((....))))))..))).))))).((.((....((((((.((...(((((.(((....((((((((.(((...)))..)))))))).)))))))).))..))))))..)).))....(((((((...))))))).......
Method 1: RNAfold - direct fold
Energy -67 kcal/mol
Model for
root see NCBI Taxonomy
cellular organisms see NCBI Taxonomy
Eukaryota see NCBI Taxonomy
Fungi/Metazoa group see NCBI Taxonomy
Fungi see NCBI Taxonomy
environmental samples see NCBI Taxonomy
uncultured fungus see NCBI Taxonomy
226349021 (Method 3) see NCBI Nucleotide
Dikarya see NCBI Taxonomy
Basidiomycota see NCBI Taxonomy
Agaricomycotina see NCBI Taxonomy
Agaricomycetes see NCBI Taxonomy
Agaricomycetes incertae sedis see NCBI Taxonomy
Corticiales see NCBI Taxonomy
Corticiaceae see NCBI Taxonomy
Hyphodontia see NCBI Taxonomy
Hyphodontia nespori see NCBI Taxonomy
92110576 (Method 3) see NCBI Nucleotide
92110577 (Method 3) see NCBI Nucleotide
92110578 (Method 3) see NCBI Nucleotide
Annotation Process: HMM annotation
Start: 391
End: 602

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