Koetschan et al. (2010) NAR 38:D275-9
Selig et al. (2008) NAR 36:D377-380.
Schultz et al. (2006) NAR 34:W704-7.
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ITS2 3D structure
(Keller et al. 2010)

Chlorophyta hypertree
(Buchheim et al. 2011)
Fig1, Fig2, Fig3, Fig4

GI 166456

Figure

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Details

GI 166456 see NCBI Nucleotide
Accession L07130
Date 2011/04/01
Lineage see NCBI Taxonomy root ; cellular organisms ; Eukaryota ; Fungi/Metazoa group ; Fungi ; Dikarya ; Ascomycota ; saccharomyceta ; Pezizomycotina ; leotiomyceta ; sordariomyceta ; Sordariomycetes ; Hypocreomycetidae ; Hypocreales ; Clavicipitaceae ; mitosporic Clavicipitaceae ; Neotyphodium ; Neotyphodium lolii 
Sequence ATTTCAACCCTCAAGCCCGCTGCGCGCTTGCTGTTGGGGACCGGCTCACCCGCCTCGCGGCGGCGGCCGCCCCCGAAATGAATCGGCGGTCTCGTCGCAGCCTCCTTTGCGTAGTAACACACCACCTCGCAACCGGGAGCGCGGCGCGGCCACTGCCGTAAAACGCCCAACTTTCTCCAAGAGTTGA
Structure ...........(((((.((...)).)))))...((((((..(((((...(((((....))))).))))).)))))).......(((((((.(((.(((.((((((((((((..((........))..)))))..))))).)).))))))..))))))).........(((((((.....))))))).
Method 1: RNAfold - direct fold
Energy -67.7 kcal/mol
Model for
root see NCBI Taxonomy
cellular organisms see NCBI Taxonomy
Eukaryota see NCBI Taxonomy
Fungi/Metazoa group see NCBI Taxonomy
Fungi see NCBI Taxonomy
Dikarya see NCBI Taxonomy
Ascomycota see NCBI Taxonomy
saccharomyceta see NCBI Taxonomy
Pezizomycotina see NCBI Taxonomy
leotiomyceta see NCBI Taxonomy
sordariomyceta see NCBI Taxonomy
Sordariomycetes see NCBI Taxonomy
Hypocreomycetidae see NCBI Taxonomy
Hypocreales see NCBI Taxonomy
Clavicipitaceae see NCBI Taxonomy
mitosporic Clavicipitaceae see NCBI Taxonomy
Neotyphodium see NCBI Taxonomy
Neotyphodium sp. FaTG-2 see NCBI Taxonomy
166457 (Method 2) see NCBI Nucleotide
Neotyphodium lolii see NCBI Taxonomy
55771301 (Method 2) see NCBI Nucleotide
Annotation Process: HMM annotation
Start: 332
End: 518

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